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@article{avants2008,
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  year         = 2008,
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}
@article{avants2011,
  title        = {A reproducible evaluation of {ANTs} similarity metric performance in brain image registration},
  author       = {Brian B. Avants and Nicholas J. Tustison and Gang Song and Philip A. Cook and Arno Klein and James C. Gee},
  year         = 2011,
  journal      = {NeuroImage},
  volume       = 54,
  number       = 3,
  pages        = {2033--2044},
  doi          = {10.1016/j.neuroimage.2010.09.025},
  url          = {https://doi.org/10.1016/j.neuroimage.2010.09.025}
}
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  volume       = 2,
  pages        = {44--51},
  doi          = {10.1109/CVPR.2005.176},
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}
@article{awate2006,
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  year         = 2006,
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  volume       = 28,
  number       = 3,
  pages        = {364--376},
  doi          = {10.1109/TPAMI.2006.64},
  url          = {https://doi.org/10.1109/TPAMI.2006.64}
}
@book{bertero1998,
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}
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}
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@inbook{bowdler1971,
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}
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}
@article{buades2008,
  title        = {Nonlocal Image and Movie Denoising},
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  url          = {https://doi.org/10.1007/s11263-007-0052-1}
}
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  publisher    = {Springer Berlin Heidelberg},
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@article{christensen2001,
  abstract = {This paper presents a new method for image registration based on jointly estimating the forward and reverse transformations between two images while constraining these transforms to be inverses of one another. This approach produces a consistent set of transformations that have less pairwise registration error, i.e., better correspondence, than traditional methods that estimate the forward and reverse transformations independently. The transformations are estimated iteratively and are restricted to preserve topology by constraining them to obey the laws of continuum mechanics. The transformations are parameterized by a Fourier series to diagonalize the covariance structure imposed by the continuum mechanics constraints and to provide a computationally efficient numerical implementation. Results using a linear elastic material constraint are presented using both magnetic resonance and X-ray computed tomography image data. The results show that the joint estimation of a consistent set of forward and reverse transformations constrained by linear-elasticity give better registration results than using either constraint alone or none at all.},
  author = {Christensen, G E and Johnson, H J},
  date-added = {2025-08-18 09:14:19 -0700},
  date-modified = {2025-08-18 09:14:19 -0700},
  doi = {10.1109/42.932742},
  journal = {IEEE Trans Med Imaging},
  journal-full = {IEEE transactions on medical imaging},
  mesh = {Algorithms; Brain; Fourier Analysis; Humans; Image Interpretation, Computer-Assisted; Image Processing, Computer-Assisted; Magnetic Resonance Imaging; Mathematics; Tomography, X-Ray Computed},
  month = {Jul},
  number = {7},
  pages = {568-82},
  pmid = {11465464},
  pst = {ppublish},
  title = {Consistent image registration},
  volume = {20},
  year = {2001},
  bdsk-url-1 = {https://doi.org/10.1109/42.932742}
}

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@article{hasan2001,
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  title={Scalable Simple Linear Iterative Clustering (SSLIC) Using a Generic and Parallel Approach},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/8hic7f},
  DOI={10.54294/8hic7f},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lowekamp, Bradley and Chen, David and Yaniv, Ziv and Yoo, Terry},
  year={2018},
  month=jul }
@article{Mosaliganti_2009_b,
  title={Level Set Segmentation: Active Contours without edge},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/8jk6oy},
  DOI={10.54294/8jk6oy},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Mosaliganti, Kishore and Smith, Benjamin and Gelas, Arnaud and Gouaillard, Alexandre and megason, sean},
  year={2009},
  month=mar }
@article{Tustison_2016,
  title={Two Luis Miguel fans walk into a bar in Nagoya ---&gt; (yada, yada, yada) ---&gt; an ITK-implementation of a popular patch-based denoising filter},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/9f5wt3},
  DOI={10.54294/9f5wt3},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Tustison, Nicholas J. and Manjon, Jose},
  year={2016},
  month=aug }
@article{Mccormick_2016,
  title={Performance Benchmarking the Insight Toolkit},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/9feae9},
  DOI={10.54294/9feae9},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Mccormick, Matthew and Kang, Hyun-jae and BARRE, Sebastien},
  year={2016},
  month=jul }
@article{Zuki__2016_b,
  title={ND morphological contour interpolation},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/achtrg},
  DOI={10.54294/achtrg},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Zukić, Dženan and Vicory, Jared and Mccormick, Matthew and Wisse, Laura and Gerig, Guido and Yushkevich, Paul and Aylward, Stephen},
  year={2016},
  month=aug }
@article{Beare_2008,
  title={Morphology with parabolic structuring elements},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/aq68pt},
  DOI={10.54294/aq68pt},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Beare, Richard},
  year={2008},
  month=dec }
@article{Lehmann_2005,
  title={Binary morphological closing and opening image filters},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/bcwtvq},
  DOI={10.54294/bcwtvq},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lehmann, Gaetan},
  year={2005},
  month=nov }
@article{Mosaliganti_2010,
  title={Support for Streaming the JPEG2000 File Format},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/bo53br},
  DOI={10.54294/bo53br},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Mosaliganti, Kishore and Ibanez, Luis and Megason, Sean},
  year={2010},
  month=aug }
@article{Lehmann_2008,
  title={Efficient contour detection in binary and label images},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/c7d3gv},
  DOI={10.54294/c7d3gv},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lehmann, Gaetan},
  year={2008},
  month=apr }
@article{Vidal_Migallon_2013,
  title={GPU and CPU implementation of Young - Van Vliet’s Recursive Gaussian Smoothing Filter},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/cpyaig},
  DOI={10.54294/cpyaig},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Vidal-Migallon, Irina and Commowick, Olivier and Pennec, Xavier and Dauguet, Julien and Vercauteren, Tom},
  year={2013},
  month=jul }
@article{Mueller_2010,
  title={Cuberille Implicit Surface Polygonization for ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/df9mgw},
  DOI={10.54294/df9mgw},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Mueller, Dan},
  year={2010},
  month=jul }
@article{Tustison_2007_b,
  title={Go-Go Gabor Gadgetry},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/dhogdz},
  DOI={10.54294/dhogdz},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Tustison, Nicholas J. and Gee, James},
  year={2007},
  month=apr }
@article{Tustison_2009_a,
  title={Image Kernel Convolution},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/e292kx},
  DOI={10.54294/e292kx},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Tustison, Nicholas J. and Gee, James},
  year={2009},
  month=jan }
@article{Schaerer_2014,
  title={A MultipleImageIterator for iterating over multiple images simultaneously},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/e5lmyz},
  DOI={10.54294/e5lmyz},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Schaerer, Joël},
  year={2014},
  month=feb }
@article{Beare_2011,
  title={Histogram-based thresholding - some missing methods},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/efycla},
  DOI={10.54294/efycla},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Beare, Richard},
  year={2011},
  month=jun }
@article{Mirebeau_2014,
  title={Anisotropic Diffusion in ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/en3833},
  DOI={10.54294/en3833},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Mirebeau, Jean-marie and Fehrenbach, Jérôme and Risser, Laurent and Tobji, Shaza},
  year={2014},
  month=dec }
@article{Vigneault_2016,
  title={Perturbing Mesh Vertices with Additive Gaussian Noise},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/evr01z},
  DOI={10.54294/evr01z},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Vigneault, Davis},
  year={2016},
  month=nov }
@article{Tustison_2011,
  title={Run-Length Matrices For Texture Analysis},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/ex0itu},
  DOI={10.54294/ex0itu},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Tustison, Nicholas J. and Gee, James},
  year={2011},
  month=may }
@article{Kim_2011,
  title={Affine Transformation for Landmark Based Registration Initializer in ITK},
  url={https//dx.doi.org/10.54294/fge470},
  DOI={10.54294/fge470},
  journal={The MIDAS Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Kim, Eun young and Johnson, Hans and Williams, Norman},
  year={2011},
  month=jul }
@article{Hatt_2012,
  title={Multi-scale Steerable Phase-Symmetry Filters for ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/gcb82u},
  DOI={10.54294/gcb82u},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Hatt, Charles},
  year={2012},
  month=mar }
@article{Urish_2005,
  title={Unsupervised Segmentation for Myofiber Counting in Immunofluorescent Microscopy Images},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/h1vbsl},
  DOI={10.54294/h1vbsl},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Urish, Kenneth and August, Jonas and Huard, Johnny},
  year={2005},
  month=aug }
@article{Warfield_2006,
  title={FFT Complex to Complex filters and helper classes},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/h4j7t7},
  DOI={10.54294/h4j7t7},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Warfield, Simon},
  year={2006},
  month=oct }
@article{Johnson_2007,
  title={BRAINSFit: Mutual Information Registrations of Whole-Brain 3D Images, Using the Insight Toolkit},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/hmb052},
  DOI={10.54294/hmb052},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Johnson, Hans and Harris, Greg and Williams, Kent},
  year={2007},
  month=oct }
@article{Beare_2005,
  title={Finding regional extrema - methods and performance},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/hva3gz},
  DOI={10.54294/hva3gz},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Beare, Richard and Lehmann, Gaetan},
  year={2005},
  month=dec }
@article{Heibel_2007,
  title={Shaped Neighborhood based Flood Filled Conditional Iterators},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/iei8xt},
  DOI={10.54294/iei8xt},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Heibel, Hauke and Groher, Martin},
  year={2007},
  month=nov }
@article{Beare_2007_a,
  title={Grayscale morphological attribute operations},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/ifvjls},
  DOI={10.54294/ifvjls},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Beare, Richard},
  year={2007},
  month=nov }
@article{Beare_2007_b,
  title={Efficient implementation of kernel filtering},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/igq8fn},
  DOI={10.54294/igq8fn},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Beare, Richard and Lehmann, Gaetan},
  year={2007},
  month=jul }
@article{Shamonin_2012,
  title={An OpenCL implementation of the Gaussian pyramid and the resampler},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/j5h811},
  DOI={10.54294/j5h811},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Shamonin, Denis and Staring, Marius},
  year={2012},
  month=dec }
@article{Baghdadi_2006,
  title={MINC2.0 IO Support for ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/j8lsa6},
  DOI={10.54294/j8lsa6},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Baghdadi, Leila},
  year={2006},
  month=apr }
@article{Tustison_2010,
  title={N4ITK: Nick’s N3 ITK Implementation For MRI Bias Field Correction},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/jculxw},
  DOI={10.54294/jculxw},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Tustison, Nicholas J. and Gee, James},
  year={2010},
  month=dec }
@article{Burstein_2006,
  title={Support for “cub” image format},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/k9nj7c},
  DOI={10.54294/k9nj7c},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Burstein, Pablo and Yushkevich, Paul and Gee, James},
  year={2006},
  month=aug }
@article{Beare_2006,
  title={The watershed transform in ITK - discussion and new developments},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/lf8u75},
  DOI={10.54294/lf8u75},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Beare, Richard and Lehmann, Gaetan},
  year={2006},
  month=jun }
@article{Bowers_2013,
  title={Principal Components Analysis of Scalar, Vector, and Mesh Vertex Data},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/loekqj},
  DOI={10.54294/loekqj},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Bowers, Michael and Younes, Laurent},
  year={2013},
  month=aug }
@article{Macia_2007,
  title={Generalized Computation of Gaussian Derivatives Using ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/mrg5is},
  DOI={10.54294/mrg5is},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Macia, Ivan},
  year={2007},
  month=oct }
@article{Gao_2006,
  title={Conformal Flattening ITK Filter},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/msr7a5},
  DOI={10.54294/msr7a5},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Gao, Yi and Melonakos, John and Melonakos, John and Tannenbaum, Allen},
  year={2006},
  month=jul }
@article{Yushkevich_2009,
  title={Gaussian Interpolation},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/n8k79e},
  DOI={10.54294/n8k79e},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Yushkevich, Paul and Tustison, Nicholas J. and Gee, James},
  year={2009},
  month=nov }
@article{Tustison_2009_b,
  title={Stochastic Fractal Dimension Image},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/ne109t},
  DOI={10.54294/ne109t},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Tustison, Nicholas J. and Gee, James},
  year={2009},
  month=apr }
@article{Woehr_2009,
  title={A Fast Approximation to the Bilateral Filter for ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/noo5vc},
  DOI={10.54294/noo5vc},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Woehr, Jordan},
  year={2009},
  month=aug }
@article{Bigler_2008,
  title={MR Parameter Map Suite: ITK Classes for Calculating Magnetic Resonance T2 and T1 Parameter Maps},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/o8w4c0},
  DOI={10.54294/o8w4c0},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Bigler, Don and Meadowcroft, Mark and Sun, Xiaoyan and Vesek, Jeffrey and Dresner, Alex and Smith, Michael and Yang, Qing},
  year={2008},
  month=jun }
@article{Pincus_2006,
  title={ContourExtractor2DImageFilter: A subpixel-precision image isocontour extraction filter.},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/olkmog},
  DOI={10.54294/olkmog},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Pincus, Zachary},
  year={2006},
  month=feb }
@article{Lowekamp_2013,
  title={BinShrink: A multi-resolution filter with cache efficient averaging.},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/p39qox},
  DOI={10.54294/p39qox},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lowekamp, Bradley and Chen, David},
  year={2013},
  month=nov }
@article{Lehmann_2007,
  title={Label object representation and manipulation with ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/q6auw4},
  DOI={10.54294/q6auw4},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lehmann, Gaetan},
  year={2007},
  month=aug }
@article{Vimort_2017_b,
  title={Computing Textural Feature Maps for N-Dimensional images},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/qy48ty},
  DOI={10.54294/qy48ty},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Vimort, Jean-baptiste and Mccormick, Matthew and Budin, Francois and Paniagua, Beatriz},
  year={2017},
  month=jul }
@article{Gelas_2013,
  title={Laplacian Mesh Deformation},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/s91axg},
  DOI={10.54294/s91axg},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Gelas, Arnaud},
  year={2013},
  month=jun }
@article{Padfield_2013,
  title={A Label Geometry Image Filter for Multiple Object Measurement},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/saa3nn},
  DOI={10.54294/saa3nn},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Padfield, Dirk and Miller, James},
  year={2013},
  month=mar }
@article{Zuki__2016_a,
  title={RLEImage: run-length encoded memory compression scheme for an itk::Image},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/t82x76},
  DOI={10.54294/t82x76},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Zukić, Dženan and Mccormick, Matthew and Gerig, Guido and Yushkevich, Paul},
  year={2016},
  month=aug }
@article{Bican_2006,
  title={Polar Transforms for ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/t8t3j2},
  DOI={10.54294/t8t3j2},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Bican, Jakub},
  year={2006},
  month=oct }
@article{Tustison_2009_c,
  title={Meeting Andy Warhol Somewhere Over the Rainbow: RGB Colormapping and ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/tmojbk},
  DOI={10.54294/tmojbk},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Tustison, Nicholas J. and Zhang, Hui and Lehmann, Gaetan and Yushkevich, Paul and Gee, James},
  year={2009},
  month=jan }
@article{Schmidt_Richberg_2014,
  title={A Flexible Variational Registration Framework},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/ts6kgm},
  DOI={10.54294/ts6kgm},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Schmidt-Richberg, Alexander and Werner, René and Handels, Heinz and Ehrhardt, Jan},
  year={2014},
  month=may }
@article{Lehmann_2010_c,
  title={Deconvolution: infrastructure and reference algorithms},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/tvgfv1},
  DOI={10.54294/tvgfv1},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lehmann, Gaëtan},
  year={2010},
  month=aug }
@article{Antiga_2007,
  title={Generalizing vesselness with respect to dimensionality and shape},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/urgadx},
  DOI={10.54294/urgadx},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Antiga, Luca},
  year={2007},
  month=aug }
@article{Vercauteren_2008,
  title={Diffeomorphic Demons Using ITK’s Finite Difference Solver Hierarchy},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/ux2obj},
  DOI={10.54294/ux2obj},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Vercauteren, Tom and Pennec, Xavier and Perchant, Aymeric and Ayache, Nicholas},
  year={2008},
  month=nov }
@article{Vimort_2017_a,
  title={Computing Bone Morphometric Feature Maps from 3-Dimensional Images},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/vctqy4},
  DOI={10.54294/vctqy4},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Vimort, Jean-baptiste and Mccormick, Matthew and Paniagua, Beatriz},
  year={2017},
  month=nov }
@article{Lehmann_2010_a,
  title={Noise simulation},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/vh6vbw},
  DOI={10.54294/vh6vbw},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lehmann, Gaetan},
  year={2010},
  month=jul }
@article{Zhu_2011,
  title={Triangle Mesh Subdivision},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/vw0ke0},
  DOI={10.54294/vw0ke0},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Zhu, Wanlin},
  year={2011},
  month=jul }
@article{Hawley_2009,
  title={Reader/Writer for Analyze Object Maps for ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/w2jytv},
  DOI={10.54294/w2jytv},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Hawley, Jeffrey and Johnson, Hans},
  year={2009},
  month=mar }
@article{Mosaliganti_2009_c,
  title={Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/wvwmf8},
  DOI={10.54294/wvwmf8},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Mosaliganti, Kishore and Smith, Benjamin and Gelas, Arnaud and Gouaillard, Alexandre and Megason, Sean},
  year={2009},
  month=may }
@article{Lehmann_2006_e,
  title={FFT Shift},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/xd0lzg},
  DOI={10.54294/xd0lzg},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lehmann, Gaetan},
  year={2006},
  month=oct }
@article{Lehmann_2006_f,
  title={Label overlay},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/xr1bvx},
  DOI={10.54294/xr1bvx},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lehmann, Gaetan},
  year={2006},
  month=feb }
@article{Tustison_2017,
  title={A patch-based framework for new ITK functionality: Joint fusion, denoising, and non-local super-resolution},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/ywuouh},
  DOI={10.54294/ywuouh},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Tustison, Nicholas J. and Avants, Brian and Wang, Hongzhi and Xie, Long and Coupe, Pierrick and Yushkevich, Paul and Manjon, Jose},
  year={2017},
  month=mar }
@article{Mueller_2008,
  title={Fast Marching Minimal Path Extraction in ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/z5zwhh},
  DOI={10.54294/z5zwhh},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Mueller, Dan},
  year={2008},
  month=mar }
@article{Zosso_2007,
  title={Direct Fourier Tomographic Reconstruction Image-To-Image Filter},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/z83ly1},
  DOI={10.54294/z83ly1},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Zosso, Dominique and Bach Cuadra, Meritxell and Thiran, Jean-Philippe},
  year={2007},
  month=aug }
@article{Tustison_2007_a,
  title={Gridding Graphic Graticules},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/ze1ssz},
  DOI={10.54294/ze1ssz},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Tustison, Nicholas J. and Avants, Brian and Gee, James},
  year={2007},
  month=jan }
@article{Mccormick_2010_a,
  title={Higher Order Accurate Derivative and Gradient Calculation in ITK},
  ISSN={2327-770X},
  url={https//dx.doi.org/10.54294/zv7979},
  DOI={10.54294/zv7979},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Mccormick, Matthew},
  year={2010},
  month=nov }
@article{Mccormick_2010_b,
  title={An Open Source, Fast Ultrasound B-Mode Implementation for Commodity Hardware},
  ISSN={2327-770X},
  url={http://dx.doi.org/10.54294/yjowe4},
  DOI={10.54294/yjowe4},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Mccormick, Matthew},
  year={2010},
  month=may }
@article{Lowekamp_2010,
  title={A Streaming IO Base Class and Support for Streaming the MRC and VTK File Format},
  ISSN={2327-770X},
  url={http://dx.doi.org/10.54294/ufs19w},
  DOI={10.54294/ufs19w},
  journal={The Insight Journal},
  publisher={NumFOCUS - Insight Software Consortium (ITK)},
  author={Lowekamp, Bradley and Chen, David},
  year={2010},
  month=jun }
